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エルウィニア科

ウィキペディアから、無料の百科事典
エルウィニア科
トリプチケースソイ寒天培地上のPantoea piersoniiコロニー
分類
ドメイン : 真正細菌
Bacteria
界 : シュードモナス界
Pseudomonadati
門 : シュードモナス門
Pseudomonadota
綱 : ガンマプロテオバクテリア綱
Gammaproteobacteria
目 : 腸内細菌目
Enterobacterales
科 : エルウィニア科
Erwiniaceae
学名
Erwiniaceae
Adeolu et al. 2016[1]
(IJSEMリストに掲載 2017)[2]
タイプ属
エルウィニア属
Erwinia
Winslow et al. 1920[3]
(IJSEMリストに掲載 1980)[4]
修正 Hauben et al. 1998[5]
(IJSEMリストに掲載 1999)[6]
下位分類(属)
2026年10月現在[7]
正名（全9属）
推奨名（全1属）
  • "Paramixta"
    Kim et al. 2024[29]
シノニム（全1属）
  • Kalamiella
    Singh et al. 2019[30]
    (IJSEMリストに掲載 2019)[31]
正名はパントエア属（Pantoea）

エルウィニア科（エルウィニアか、Erwiniaceae）とは、真正細菌の腸内細菌目の科の一つである。

特徴

カタラーゼ陽性且つオキシダーゼ陰性であり、インドールや硫化水素を産生しない[1]。Erwinia toletana、Erwinia typographi、及びErwinia oleaeの一部の菌株を除き、大部分の種はフォーゲスプロスカウエル試験で陽性を示す。本科の細菌は、表1に列挙したタンパク質に見られる保存されたシグネチャーインデル（CSIs）によって、他のすべての細菌と区別することができる。

表1．エルウィニア科における保存されたシグネチャーインデル[1]
タンパク質GenBankアクセッション番号インデルサイズインデル位置
グルタミン酸-システインリガーゼ
Glutamate – cysteine ligase		WP_0315941751 aa ins273–313
DNAジャイレースサブユニットB
DNA gyrase subunit B		WP_0038496422 aa del597–635
LPSアセンブリータンパク質LptD
LPS assembly protein LptD		WP_0504990872 aa del582–622
チオール-ジスルフィド交換タンパク質DsbA前駆体
Thiol:disulfide interchange protein DsbA precursor		WP_0393871511 aa ins116–155
二成分制御系センサーヒスチジンキナーゼ
Two-component sensor histidine kinase		WP_0106709891 aa ins117–159
RNAヘリカーゼ
RNA helicase		WP_0041551351 aa ins220–254
機能未知タンパク質WP_0226252841 aa ins137–174
tRNAシュードウリジン(13)合成酵素TruD
tRNA pseudouridine(13) synthase TruD		WP_0038491021 aa ins191–232
グリシン/ベタインABC輸送体ATP結合タンパク質
Glycine/betaine ABC transporter ATP-binding protein		WP_0337786041 aa ins286–331
転写調節因子
Transcriptional regulator		WP_0041717623 aa del59–98
スーパーオキシドディスムターゼ
Superoxide dismutase		WP_0041611101 aa ins30–64
定常期誘導性タンパク質CsiE
Stationary phase inducible protein CsiE		WP_0226241193 aa del144–185

脚注

  1. 1 2 3 Mobolaji Adeolu, Seema Alnajar, Sohail Naushad and Radhey S. Gupta (01 December 2016). “Genome-based phylogeny and taxonomy of the ‘Enterobacteriales’: proposal for Enterobacterales ord. nov. divided into the families Enterobacteriaceae, Erwiniaceae fam. nov., Pectobacteriaceae fam. nov., Yersiniaceae fam. nov., Hafniaceae fam. nov., Morganellaceae fam. nov., and Budviciaceae fam. nov.”. International Journal of Systematic and Evolutionary Microbiology 66 (12): 5575-5599. doi:10.1099/ijsem.0.001485. PMID 27620848.
  2. ↑ Aharon Oren and George M. Garrity (01 March 2017). “Notification that new names of prokaryotes, new combinations and new taxonomic opinions have appeared in volume 66, part 12, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 67 (3): 525-528. doi:10.1099/ijsem.0.001834.
  3. 1 2 “THE FAMILIES AND GENERA OF THE BACTERIA FINAL REPORT OF THE COMMITTEE OF THE SOCIETY OF AMERICAN BACTERIOLOGISTS ON CHARACTERIZATION AND CLASSIFICATION OF BACTERIAL TYPES”. Journal of Bacteriology 5 (3): 191-229. (1 May 1920). doi:10.1128/jb.5.3.191-229.1920. PMC 378870. PMID 16558872.
  4. 1 2 V. B. D. Skerman; Vicki. McGOWAN; P. H. A. Sneath (01 January 1980). “Approved Lists of Bacterial Names”. International Journal of Systematic and Evolutionary Microbiology 30 (1): 225-420. doi:10.1099/00207713-30-1-225.
  5. 1 2 Lysiane Hauben, Edward R.B. Moore, Luc Vauterin, Marijke Steenackers, Joris Mergaert, Linda Verdonck, Jean Swings. “Phylogenetic position of phytopathogens within the Enterobacteriaceae”. Systematic and Applied Microbiology. doi:10.1016/S0723-2020(98)80048-9. PMID 9779605.
  6. 1 2 “Validation of publication of new names and new combinations previously effectively published outside the IJSB”. International Journal of Systematic and Evolutionary Microbiology: 1-3. (01 January 1999). doi:10.1099/00207713-49-1-1.
  7. ↑ Jean P. Euzéby, Aidan C. Parte. “Family Erwiniaceae”. List of Prokaryotic names with Standing in Nomenclature. 2026年10月4日閲覧。
  8. ↑ Mark A. Munson, Paul Baumann and Marvin G. Kinsey. “Buchnera gen. nov. and Buchnera aphidicola sp. nov., a Taxon Consisting of the Mycetocyte-Associated, Primary Endosymbionts of Aphids”. International Journal of Systematic and Evolutionary Microbiology: 566-568. doi:10.1099/00207713-41-4-566.
  9. ↑ “Notification that New Names and New Combinations Have Appeared in the IJSB”. International Journal of Systematic and Evolutionary Microbiology: 192. (01 January 1992). doi:10.1099/00207713-42-1-192.
  10. ↑ Craig D. Soutar & John Stavrinides (05 January 2022). “Phylogenomic analysis of the Erwiniaceae supports reclassification of Kalamiella piersonii to Pantoea piersonii comb. nov. and Erwinia gerundensis to the new genus Duffyella gen. nov. as Duffyella gerundensis comb. nov”. Molecular Genetics and Genomics: 213–225. doi:10.1007/s00438-021-01829-3. PMID 34988605.
  11. ↑ Aharon Oren and Markus Göker (01 February 2023). “Validation List no. 209. Valid publication of new names and new combinations effectively published outside the IJSEM”. International Journal of Systematic and Evolutionary Microbiology: 5709. doi:10.1099/ijsem.0.005709.
  12. ↑ Marike Palmer, Emma T. Steenkamp, Martin P. A. Coetzee, Juanita R. Avontuur, Wai-Yin Chan, Elritha van Zyl, Jochen Blom5​ and Stephanus N. Venter (01 April 2018). “Mixta gen. nov., a new genus in the Erwiniaceae”. International Journal of Systematic and Evolutionary Microbiology: 1396-1407. doi:10.1099/ijsem.0.002540. PMID 29485394.
  13. ↑ Aharon Oren, George M. Garrity (01 July 2018). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 68, part 4, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 68 (7): 2134-2136. doi:10.1099/ijsem.0.002764.
  14. ↑ Françoise Gavini, Joris Mergaert, Amor Beji, Christine Mielcarek, Daniel Izard, Karel Kersters and Jozef De Ley (01 July 1989). “Transfer of Enterobacter agglomerans (Beijerinck 1888) Ewing and Fife 1972 to Pantoea gen. nov. as Pantoea agglomerans comb, nov. and Description of Pantoea dispersa sp. nov.”. International Journal of Systematic and Evolutionary Microbiology: 337-345. doi:10.1099/00207713-39-3-337.
  15. ↑ Joris Mergaert, Linda Verdonck and Karel Kersters (01 January 1993). “Transfer of Erwinia ananas (synonym, Erwinia uredovora) and Erwinia stewartii to the Genus Pantoea emend. as Pantoea ananas (Serrano 1928) comb. nov. and Pantoea stewartii (Smith 1898) comb. nov., Respectively, and Description of Pantoea stewartii subsp. indologenes subsp. nov.”. International Journal of Systematic and Evolutionary Microbiology: 162-173. doi:10.1099/00207713-43-1-162.
  16. ↑ “Notification that New Names and New Combinations Have Appeared in IJSB”. International Journal of Systematic and Evolutionary Microbiology: 399. (01 April 1993). doi:10.1099/00207713-43-2-399.
  17. ↑ Carrie L. Brady, Ilse Cleenwerck, Stephanus N. Venter, Katrien Engelbeen, Paul De Vos and Teresa A. Coutinho (01 October 2010). “Emended description of the genus Pantoea, description of four species from human clinical samples, Pantoea septica sp. nov., Pantoea eucrina sp. nov., Pantoea brenneri sp. nov. and Pantoea conspicua sp. nov., and transfer of Pectobacterium cypripedii (Hori 1911) Brenner et al. 1973 emend. Hauben et al. 1998 to the genus as Pantoea cypripedii comb. nov.”. International Journal of Systematic and Evolutionary Microbiology: 2430-2440. doi:10.1099/ijs.0.017301-0. PMID 19946052.
  18. ↑ “Notification that new names and new combinations have appeared in volume 60, part 10, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology: 4-5. (01 January 2011). doi:10.1099/ijs.0.030312-0.
  19. ↑ Malka Halpern, Svetlana Fridman, Yana Aizenberg-Gershtein1 and Ido Izhaki (01 January 2013). “Transfer of Pseudomonas flectens Johnson 1956 to Phaseolibacter gen. nov., in the family Enterobacteriaceae, as Phaseolibacter flectens gen. nov., comb. nov.”. International Journal of Systematic and Evolutionary Microbiology: 268-273. doi:10.1099/ijs.0.033654-0. PMID 22407791.
  20. ↑ “Notification that new names and new combinations have appeared in volume 63, part 1, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 63 (Pt_4): 1211-1213. (01 April 2013). doi:10.1099/ijs.0.051581-0.
  21. ↑ “Tatumella ptyseos gen. nov., sp. nov., a member of the family Enterobacteriaceae found in clinical specimens”. Journal of Clinical Microbiology 14 (1): 79-88. (1 July 1981). doi:10.1128/jcm.14.1.79-88.1981. PMC 271905. PMID 7263854.
  22. ↑ “Validation of the Publication of New Names and New Combinations Previously Effectively Published Outside the IJSB: List No. 8”. International Journal of Systematic and Evolutionary Microbiology 32 (2): 266-268. (01 April 1982). doi:10.1099/00207713-32-2-266.
  23. ↑ Carrie L. Brady, Stephanus N. Venter, Ilse Cleenwerck, Katrien Vandemeulebroecke, Paul De Vos and Teresa A. Coutinho (01 March 2010). “Transfer of Pantoea citrea, Pantoea punctata and Pantoea terrea to the genus Tatumella emend. as Tatumella citrea comb. nov., Tatumella punctata comb. nov. and Tatumella terrea comb. nov. and description of Tatumella morbirosei sp. nov.”. International Journal of Systematic and Evolutionary Microbiology: 484-494. doi:10.1099/ijs.0.012070-0. PMID 19654354.
  24. ↑ “Notification that new names and new combinations have appeared in volume 60, part 3, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 60 (6): 1253-1255. (01 June 2010). doi:10.1099/ijs.0.025270-0.
  25. ↑ SERAP AKSOY (01 October 1995). “Wigglesworthia gen. nov. and Wigglesworthia glossinidia sp. nov., Taxa Consisting of the Mycetocyte-Associated, Primary Endosymbionts of Tsetse Flies”. International Journal of Systematic and Evolutionary Microbiology: 848-51. doi:10.1099/00207713-45-4-848. PMID 7547309.
  26. ↑ “Notification that New Names and New Combinations Have Appeared in Volume 45, No. 4, of the IJSB”. International Journal of Systematic and Evolutionary Microbiology 46 (1): 364-365. (01 January 1996). doi:10.1099/00207713-46-1-364.
  27. ↑ Carrie Brady, Sundeep Kaur, Bridget Crampton, Daniel Maddock, Dawn Arnold, Sandra Denman (17 November 2022). “Transfer of Erwinia toletana and Erwinia iniecta to a novel genus Winslowiella gen. nov. as Winslowiella toletana comb. nov. and Winslowiella iniecta comb. nov. and description of Winslowiella arboricola sp. nov., isolated from bleeding cankers on broadleaf hosts”. Frontiers in Microbiology 13: 1063107. doi:10.3389/fmicb.2022.1063107. PMC 9712802. PMID 36466697.
  28. ↑ Aharon Oren and Markus Göker (31 March 2023). “Validation List no. 210. Valid publication of new names and new combinations effectively published outside the IJSEM”. International Journal of Systematic and Evolutionary Microbiology: 5812. doi:10.1099/ijsem.0.005812.
  29. ↑ Jueun Kim, Hyosuk Yun, Aminallah Tahmasebi, Jiyoung Nam, Ha Pham, Yong-Hak Kim, Hye Jung Min & Chul Won Lee (05 July 2024). “Paramixta manurensis gen. nov., sp. nov., a novel member of the family Erwiniaceae producing indole-3-acetic acid isolated from mushroom compost”. Scientific Reports 14: 15542. doi:10.1038/s41598-024-65803-w. PMC 11226699. PMID 38969698.
  30. ↑ Nitin Kumar Singh, Jason M. Wood, Snehit S. Mhatre & Kasthuri Venkateswaran (13 July 2019). “Correction to: Metagenome to phenome approach enables isolation and genomics characterization of Kalamiella piersonii gen. nov., sp. nov. from the International Space Station”. Applied Microbiology and Biotechnology (16): 6851–6852. doi:10.1007/s00253-019-10009-8. PMID 31302709.
  31. ↑ Aharon Oren and Markus Göker (01 November 2019). “List of new names and new combinations previously effectively, but not validly, published”. International Journal of Systematic and Evolutionary Microbiology 69 (11): 3313-3314. doi:10.1099/ijsem.0.003740.